Monday, 20 October 2014

How breeders and processors can work together?

Dr Sharon Hall will talk about the needs of the potato industry and how breeders and growers can work with the processors to ensure the quality and volume needed for year-round, value-added potato products.

AVR launches Puma 3, its new four-row harvester

Potato machine constructor AVR is introducing its new Puma 3, a machine with tight lines, which grant it a very modern look. The real innovations for this self-propelled, four-row harvester are its more powerful

50 small-scale farmers will benefit from signed memorandum with PepsiCo Food Vietnam

PepsiCo Foods Vietnam Co (PFVC) has signed a memorandum of understanding to introduce a sustainable contract potato-farming model.

New method to stop potato parasitic worms using fungi

Scientists have developed a new way to stop the parasitic worm Globodera rostochiensis causes damage to potatoes.

LEAF’s annual President Event to focus on defining resilience and diversity in agriculture

Linking Environment And Farming (LEAF)’s annual President Event will take place on Tuesday November, 11, at the HSBC Headquarters, CanaryWharf, London. 

How breeders and processors can work together?

How breeders and processors can work together?

Dr Sharon Hall will talk about the needs of the potato industry and how breeders and growers can work wi...

LEAF’s annual President Event to focus on defining resilience and diversity in agriculture

LEAF’s annual President Event to focus on defining resi...

Linking Environment And Farming (LEAF)’s annual President Event will take place on Tuesday November, 11, a...

The World Potato Congress Industry Awards are open for nominations

The World Potato Congress Industry Awards are open for ...

The World Potato Congress Industry Awards are an important and prestigious event on the international po...

Florimond Desprez Group acquires Germicopa, a potato seed company

Florimond Desprez Group acquires Germicopa, a potato se...

Florimond Desprez Group acquired Germicopa, one of the most important French potato seed companies and ...

Cargill reinforces its commitment to food security

Cargill reinforces its commitment to food security

Cargill is calling for coordinated action by governments, the private sector and civil society to ensur...

“Why are the fries so good?” McDonald’s answers to all their customers' questions

“Why are the fries so good?” McDonald’s answers to all ...

McDonald's USA invites their customers, fans and food skeptics to ask all they want to know in a campai...

UPDATE Urschel launches its equipment at Emballage Exhibition Paris and International FoodTec India

UPDATE Urschel launches its equipment at Emballage Exhi...

The new Sprint 2 Dicer by Urschel (http://www.urschel.com/) can be seen at Emballage in Paris beginning N...

Launches at Cibus Tec Parma for Urschel: a wide variety of machines ready for attendees

Launches at Cibus Tec Parma for Urschel: a wide variety...

Cibus Tec is combined with Food Pack to serve all areas of food processing and packaging in one locatio...

AVR launches Puma 3, its new four-row harvester

AVR launches Puma 3, its new four-row harvester

Potato machine constructor AVR is introducing its new Puma 3, a machine with tight lines, which grant i...

Potato Week 2014 to take place on October 6-12

Potato Week 2014 to ...

The dates for Potato Week 2014 are October 6-12 and the camp...

Kent Crisps Announces New Branding

Kent Crisps Announce...

AMC Foods announces the re-launch of their popular Kent Cr...

New DiversaCut 2110A Dicer on Display at SIAL in Paris

New DiversaCut 2110A...

Several Urschel cutting machines will be on display at Sal...

McDonald’s Japan Is Releasing Purple Sweet Potato McShake This Autumn

McDonald’s Japan Is ...

McDonald's Japan is rolling out a special purple sweet potat...

Lay's "Do Us A Flavor" Contest Finalists Announced

Lay's Do Us A Flavo...

Lay's potato chips, one of the brands from PepsiCo (http:/...

BioSafe Systems Introduces Complete Potato Storage Protection Programme

BioSafe Systems Intr...

Following research and development, BioSafe Systems offers...

Future Proofing Cheshire Potatoes

Future Proofing Ches...

Cheshire potato growers gathered at Aston Grange Farm near...

Sophisticated Potato Inspection

Sophisticated Potato...

Improvements in sorting machinery are aimed at many grower...

McCain Foods to Help Monitor Potato Crops with Drones

McCain Foods to Help...

Global potato processor McCain Foods is using drone techno...

Open Farm Sunday 2014 Review

Open Farm Sunday 201...

Farmers and their helpers celebrated this weekend the posi...

An innovative 'one stop shop' germplasm potato database resource is now available for scientists online.

The International Potato Center (known by its Spanish acronym CIP) has published a new online database for the potato and sweetpotato.

The database is searchable for more than 90 attributes related to the germplasm held in CIP's extensive genebank collections. The database took more than two years to develop, and is the first of its kind to apply a scheme originally used for housing genomics data to a genebank collection.

"It is the holy grail of the genebank and breeding information managers' community - having a data search facility for different kinds of data," says Reinhard Simon, head of CIP's Research Informatics Unit.

In recent decades, bioinformatics - the application of information technology to better understand biological processes - has been focused primarily on management systems that can deal with the enormous amount of information generated by rapid developments in molecular biology. CIP took one such system, BioMart, and created a novel application allowing integrated searches across a wide range of different data types.

"The kind of information we need is often still housed in specific databases. With this system, potentially all the evaluation data you can think of can be combined; it's a one stop shop," says Simon.

The new database includes what is called passport data, such as the origin and availability of germplasm, compliant with the standard MCPD (multicrop passport descriptor list). With characterisation data organised according to crop specific international standards, users can search for any specific traits they are looking for (e.g., drought tolerance or chipping quality) using morphological characteristics or biotic and abiotic evaluation data. Also included are molecular marker data (SSR), and the entire list of worldwide distributions of CIP held germplasm.

The flexibility of the system allows for a range of information from summary reports to detailed, accession-level information. It has a user-friendly, three-step interface, requiring little or no training. If needed, support is provided on the CIP site and by an online BioMart tutorial. Breeders, scientists, or curators who want to order germplasm from the CIP's genebank can do so via a hyperlink using a 'shopping cart' system, similar to online shopping sites.

The database also provides an important new springboard for further research. The potential is vast, explains Simon, "Curators from other genebanks sometimes need or want to corroborate information, and scientists and other researchers can use all these data for further analysis and for documenting biodiversity."

The database will be updated as new data are released and is available at www.cipotato.org/research/genebank/search

 

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